The HIV-Trace Viewer is a Galaxy visualization plugin for interactive exploration of transmission networks inferred by HIV-TRACE. It renders graph-based results directly inside Galaxy, allowing users to examine connected components, cluster sizes, and
The HIV-Trace Viewer is a Galaxy visualization plugin for interactive exploration of transmission networks inferred by HIV-TRACE. It renders graph-based results directly inside Galaxy, allowing users to examine connected components, cluster sizes, and metadata-linked attributes.
Features
Network visualization of HIV-TRACE output
Interactive node and edge exploration
Metadata integration for coloring and filtering
Seamless embedding into the Galaxy visualization framework
Installation
Place the plugin directory under Galaxy’s config/plugins/visualizations/ and restart Galaxy.
Usage
Run HIV-TRACE within Galaxy to generate a network file.
Open the dataset and select HIV-Trace Viewer from the visualization menu.
The HIV-Trace Viewer is a Galaxy visualization plugin for interactive exploration of transmission networks inferred by HIV-TRACE. It renders graph-based results directly inside Galaxy, allowing users to examine connected components, cluster sizes, and